Left reads: Input : 325312 Mapped : 277797 (85.4% of input) of these: 8264 ( 3.0%) have multiple alignments (648 have >20) Right reads: Input : 325312 Mapped : 262654 (80.7% of input) of these: 7835 ( 3.0%) have multiple alignments (648 have >20) 83.1% overall read mapping rate. Aligned pairs: 235312 of these: 6984 ( 3.0%) have multiple alignments 4618 ( 2.0%) are discordant alignments 70.9% concordant pair alignment rate.