Left reads: Input : 323205 Mapped : 273678 (84.7% of input) of these: 9901 ( 3.6%) have multiple alignments (735 have >20) Right reads: Input : 323205 Mapped : 257643 (79.7% of input) of these: 9507 ( 3.7%) have multiple alignments (735 have >20) 82.2% overall read mapping rate. Aligned pairs: 227986 of these: 8332 ( 3.7%) have multiple alignments 4460 ( 2.0%) are discordant alignments 69.2% concordant pair alignment rate.