Left reads: Input : 230186 Mapped : 185989 (80.8% of input) of these: 41547 (22.3%) have multiple alignments (1829 have >20) Right reads: Input : 230186 Mapped : 179963 (78.2% of input) of these: 40669 (22.6%) have multiple alignments (1829 have >20) 79.5% overall read mapping rate. Aligned pairs: 155589 of these: 36502 (23.5%) have multiple alignments 5050 ( 3.2%) are discordant alignments 65.4% concordant pair alignment rate.