Left reads: Input : 459997 Mapped : 390786 (85.0% of input) of these: 39620 (10.1%) have multiple alignments (5898 have >20) Right reads: Input : 459997 Mapped : 374292 (81.4% of input) of these: 38361 (10.2%) have multiple alignments (5898 have >20) 83.2% overall read mapping rate. Aligned pairs: 333038 of these: 34674 (10.4%) have multiple alignments 6614 ( 2.0%) are discordant alignments 71.0% concordant pair alignment rate.