Left reads: Input : 344593 Mapped : 285643 (82.9% of input) of these: 28945 (10.1%) have multiple alignments (1610 have >20) Right reads: Input : 344593 Mapped : 273040 (79.2% of input) of these: 27880 (10.2%) have multiple alignments (1610 have >20) 81.1% overall read mapping rate. Aligned pairs: 237127 of these: 24796 (10.5%) have multiple alignments 5575 ( 2.4%) are discordant alignments 67.2% concordant pair alignment rate.