Left reads: Input : 1166395 Mapped : 1011464 (86.7% of input) of these: 32884 ( 3.3%) have multiple alignments (995 have >20) Right reads: Input : 1166395 Mapped : 955322 (81.9% of input) of these: 31631 ( 3.3%) have multiple alignments (995 have >20) 84.3% overall read mapping rate. Aligned pairs: 863163 of these: 28422 ( 3.3%) have multiple alignments 11646 ( 1.3%) are discordant alignments 73.0% concordant pair alignment rate.