Left reads: Input : 606302 Mapped : 516908 (85.3% of input) of these: 48923 ( 9.5%) have multiple alignments (2988 have >20) Right reads: Input : 606302 Mapped : 498355 (82.2% of input) of these: 47631 ( 9.6%) have multiple alignments (2988 have >20) 83.7% overall read mapping rate. Aligned pairs: 445471 of these: 42701 ( 9.6%) have multiple alignments 9786 ( 2.2%) are discordant alignments 71.9% concordant pair alignment rate.