Left reads: Input : 178784 Mapped : 140611 (78.6% of input) of these: 6568 ( 4.7%) have multiple alignments (522 have >20) Right reads: Input : 178784 Mapped : 135039 (75.5% of input) of these: 6229 ( 4.6%) have multiple alignments (522 have >20) 77.1% overall read mapping rate. Aligned pairs: 113438 of these: 5268 ( 4.6%) have multiple alignments 1763 ( 1.6%) are discordant alignments 62.5% concordant pair alignment rate.