Left reads: Input : 184459 Mapped : 148619 (80.6% of input) of these: 8940 ( 6.0%) have multiple alignments (196 have >20) Right reads: Input : 184459 Mapped : 143067 (77.6% of input) of these: 8630 ( 6.0%) have multiple alignments (196 have >20) 79.1% overall read mapping rate. Aligned pairs: 122801 of these: 7510 ( 6.1%) have multiple alignments 2322 ( 1.9%) are discordant alignments 65.3% concordant pair alignment rate.