Left reads: Input : 254269 Mapped : 213224 (83.9% of input) of these: 8301 ( 3.9%) have multiple alignments (842 have >20) Right reads: Input : 254269 Mapped : 196777 (77.4% of input) of these: 7632 ( 3.9%) have multiple alignments (842 have >20) 80.6% overall read mapping rate. Aligned pairs: 174019 of these: 6747 ( 3.9%) have multiple alignments 4248 ( 2.4%) are discordant alignments 66.8% concordant pair alignment rate.