Left reads: Input : 214830 Mapped : 175642 (81.8% of input) of these: 16799 ( 9.6%) have multiple alignments (3290 have >20) Right reads: Input : 214830 Mapped : 178328 (83.0% of input) of these: 17036 ( 9.6%) have multiple alignments (3290 have >20) 82.4% overall read mapping rate. Aligned pairs: 153821 of these: 14974 ( 9.7%) have multiple alignments 3519 ( 2.3%) are discordant alignments 70.0% concordant pair alignment rate.