Left reads: Input : 299957 Mapped : 250260 (83.4% of input) of these: 55948 (22.4%) have multiple alignments (1864 have >20) Right reads: Input : 299957 Mapped : 239239 (79.8% of input) of these: 53816 (22.5%) have multiple alignments (1864 have >20) 81.6% overall read mapping rate. Aligned pairs: 209873 of these: 48424 (23.1%) have multiple alignments 7617 ( 3.6%) are discordant alignments 67.4% concordant pair alignment rate.