Left reads: Input : 342196 Mapped : 292581 (85.5% of input) of these: 7892 ( 2.7%) have multiple alignments (703 have >20) Right reads: Input : 342196 Mapped : 295017 (86.2% of input) of these: 7927 ( 2.7%) have multiple alignments (703 have >20) 85.9% overall read mapping rate. Aligned pairs: 260232 of these: 6939 ( 2.7%) have multiple alignments 4641 ( 1.8%) are discordant alignments 74.7% concordant pair alignment rate.