Left reads: Input : 502450 Mapped : 427644 (85.1% of input) of these: 27311 ( 6.4%) have multiple alignments (2955 have >20) Right reads: Input : 502450 Mapped : 409608 (81.5% of input) of these: 26279 ( 6.4%) have multiple alignments (2955 have >20) 83.3% overall read mapping rate. Aligned pairs: 364235 of these: 23798 ( 6.5%) have multiple alignments 8641 ( 2.4%) are discordant alignments 70.8% concordant pair alignment rate.