Left reads: Input : 271731 Mapped : 231095 (85.0% of input) of these: 8712 ( 3.8%) have multiple alignments (640 have >20) Right reads: Input : 271731 Mapped : 222521 (81.9% of input) of these: 8328 ( 3.7%) have multiple alignments (640 have >20) 83.5% overall read mapping rate. Aligned pairs: 199536 of these: 7185 ( 3.6%) have multiple alignments 3681 ( 1.8%) are discordant alignments 72.1% concordant pair alignment rate.