Left reads: Input : 331506 Mapped : 283129 (85.4% of input) of these: 27361 ( 9.7%) have multiple alignments (6017 have >20) Right reads: Input : 331506 Mapped : 266807 (80.5% of input) of these: 26364 ( 9.9%) have multiple alignments (6017 have >20) 82.9% overall read mapping rate. Aligned pairs: 237509 of these: 23443 ( 9.9%) have multiple alignments 6525 ( 2.7%) are discordant alignments 69.7% concordant pair alignment rate.