Left reads: Input : 280117 Mapped : 228857 (81.7% of input) of these: 22769 ( 9.9%) have multiple alignments (617 have >20) Right reads: Input : 280117 Mapped : 221832 (79.2% of input) of these: 22360 (10.1%) have multiple alignments (617 have >20) 80.4% overall read mapping rate. Aligned pairs: 191958 of these: 19708 (10.3%) have multiple alignments 4442 ( 2.3%) are discordant alignments 66.9% concordant pair alignment rate.