Left reads: Input : 329616 Mapped : 272462 (82.7% of input) of these: 65918 (24.2%) have multiple alignments (1837 have >20) Right reads: Input : 329616 Mapped : 259453 (78.7% of input) of these: 63687 (24.5%) have multiple alignments (1837 have >20) 80.7% overall read mapping rate. Aligned pairs: 226832 of these: 57201 (25.2%) have multiple alignments 8407 ( 3.7%) are discordant alignments 66.3% concordant pair alignment rate.