Left reads: Input : 413754 Mapped : 357187 (86.3% of input) of these: 77629 (21.7%) have multiple alignments (1517 have >20) Right reads: Input : 413754 Mapped : 344805 (83.3% of input) of these: 76088 (22.1%) have multiple alignments (1517 have >20) 84.8% overall read mapping rate. Aligned pairs: 307971 of these: 68898 (22.4%) have multiple alignments 11966 ( 3.9%) are discordant alignments 71.5% concordant pair alignment rate.