Left reads: Input : 405341 Mapped : 345308 (85.2% of input) of these: 14910 ( 4.3%) have multiple alignments (723 have >20) Right reads: Input : 405341 Mapped : 348284 (85.9% of input) of these: 15036 ( 4.3%) have multiple alignments (723 have >20) 85.6% overall read mapping rate. Aligned pairs: 308869 of these: 13342 ( 4.3%) have multiple alignments 5707 ( 1.8%) are discordant alignments 74.8% concordant pair alignment rate.