Left reads: Input : 379035 Mapped : 317319 (83.7% of input) of these: 12120 ( 3.8%) have multiple alignments (1086 have >20) Right reads: Input : 379035 Mapped : 305067 (80.5% of input) of these: 11654 ( 3.8%) have multiple alignments (1086 have >20) 82.1% overall read mapping rate. Aligned pairs: 269678 of these: 10322 ( 3.8%) have multiple alignments 6122 ( 2.3%) are discordant alignments 69.5% concordant pair alignment rate.