Left reads: Input : 353257 Mapped : 302528 (85.6% of input) of these: 11439 ( 3.8%) have multiple alignments (1004 have >20) Right reads: Input : 353257 Mapped : 282776 (80.0% of input) of these: 10845 ( 3.8%) have multiple alignments (1004 have >20) 82.8% overall read mapping rate. Aligned pairs: 253838 of these: 9681 ( 3.8%) have multiple alignments 5226 ( 2.1%) are discordant alignments 70.4% concordant pair alignment rate.