Left reads: Input : 1217141 Mapped : 1093805 (89.9% of input) of these: 130395 (11.9%) have multiple alignments (19439 have >20) Right reads: Input : 1217141 Mapped : 1051317 (86.4% of input) of these: 127598 (12.1%) have multiple alignments (19439 have >20) 88.1% overall read mapping rate. Aligned pairs: 969682 of these: 118598 (12.2%) have multiple alignments 20593 ( 2.1%) are discordant alignments 78.0% concordant pair alignment rate.