Left reads: Input : 1132729 Mapped : 1025986 (90.6% of input) of these: 155091 (15.1%) have multiple alignments (25090 have >20) Right reads: Input : 1132729 Mapped : 994182 (87.8% of input) of these: 152163 (15.3%) have multiple alignments (25090 have >20) 89.2% overall read mapping rate. Aligned pairs: 923061 of these: 140347 (15.2%) have multiple alignments 16870 ( 1.8%) are discordant alignments 80.0% concordant pair alignment rate.