Left reads: Input : 3342094 Mapped : 2957943 (88.5% of input) of these: 977297 (33.0%) have multiple alignments (226540 have >20) Right reads: Input : 3342094 Mapped : 2884172 (86.3% of input) of these: 959138 (33.3%) have multiple alignments (226539 have >20) 87.4% overall read mapping rate. Aligned pairs: 2630412 of these: 878600 (33.4%) have multiple alignments 74181 ( 2.8%) are discordant alignments 76.5% concordant pair alignment rate.