Left reads: Input : 461989 Mapped : 398854 (86.3% of input) of these: 118681 (29.8%) have multiple alignments (27084 have >20) Right reads: Input : 461989 Mapped : 391055 (84.6% of input) of these: 116827 (29.9%) have multiple alignments (27084 have >20) 85.5% overall read mapping rate. Aligned pairs: 346704 of these: 104643 (30.2%) have multiple alignments 7824 ( 2.3%) are discordant alignments 73.4% concordant pair alignment rate.