Left reads: Input : 593658 Mapped : 509743 (85.9% of input) of these: 24788 ( 4.9%) have multiple alignments (2481 have >20) Right reads: Input : 593658 Mapped : 507602 (85.5% of input) of these: 24787 ( 4.9%) have multiple alignments (2481 have >20) 85.7% overall read mapping rate. Aligned pairs: 450350 of these: 22025 ( 4.9%) have multiple alignments 8568 ( 1.9%) are discordant alignments 74.4% concordant pair alignment rate.