Left reads: Input : 2521024 Mapped : 2206502 (87.5% of input) of these: 700979 (31.8%) have multiple alignments (201063 have >20) Right reads: Input : 2521024 Mapped : 2155332 (85.5% of input) of these: 688828 (32.0%) have multiple alignments (200046 have >20) 86.5% overall read mapping rate. Aligned pairs: 1942641 of these: 628147 (32.3%) have multiple alignments 42299 ( 2.2%) are discordant alignments 75.4% concordant pair alignment rate.