Left reads: Input : 377068 Mapped : 319555 (84.7% of input) of these: 13585 ( 4.3%) have multiple alignments (1054 have >20) Right reads: Input : 377068 Mapped : 302428 (80.2% of input) of these: 12987 ( 4.3%) have multiple alignments (1055 have >20) 82.5% overall read mapping rate. Aligned pairs: 268581 of these: 11482 ( 4.3%) have multiple alignments 6715 ( 2.5%) are discordant alignments 69.4% concordant pair alignment rate.