Left reads: Input : 849394 Mapped : 742603 (87.4% of input) of these: 105830 (14.3%) have multiple alignments (18151 have >20) Right reads: Input : 849394 Mapped : 745588 (87.8% of input) of these: 106938 (14.3%) have multiple alignments (18170 have >20) 87.6% overall read mapping rate. Aligned pairs: 671799 of these: 96808 (14.4%) have multiple alignments 13252 ( 2.0%) are discordant alignments 77.5% concordant pair alignment rate.