Left reads: Input : 283973 Mapped : 241166 (84.9% of input) of these: 9004 ( 3.7%) have multiple alignments (508 have >20) Right reads: Input : 283973 Mapped : 223439 (78.7% of input) of these: 8493 ( 3.8%) have multiple alignments (508 have >20) 81.8% overall read mapping rate. Aligned pairs: 199404 of these: 7486 ( 3.8%) have multiple alignments 4409 ( 2.2%) are discordant alignments 68.7% concordant pair alignment rate.