Left reads: Input : 1059642 Mapped : 957162 (90.3% of input) of these: 105354 (11.0%) have multiple alignments (15570 have >20) Right reads: Input : 1059642 Mapped : 911291 (86.0% of input) of these: 102337 (11.2%) have multiple alignments (15570 have >20) 88.2% overall read mapping rate. Aligned pairs: 843220 of these: 94661 (11.2%) have multiple alignments 17376 ( 2.1%) are discordant alignments 77.9% concordant pair alignment rate.