Left reads: Input : 207079 Mapped : 167671 (81.0% of input) of these: 4808 ( 2.9%) have multiple alignments (244 have >20) Right reads: Input : 207079 Mapped : 159732 (77.1% of input) of these: 4591 ( 2.9%) have multiple alignments (244 have >20) 79.1% overall read mapping rate. Aligned pairs: 138526 of these: 4006 ( 2.9%) have multiple alignments 2742 ( 2.0%) are discordant alignments 65.6% concordant pair alignment rate.