Left reads: Input : 1643292 Mapped : 1458771 (88.8% of input) of these: 175702 (12.0%) have multiple alignments (25570 have >20) Right reads: Input : 1643292 Mapped : 1420250 (86.4% of input) of these: 174238 (12.3%) have multiple alignments (25570 have >20) 87.6% overall read mapping rate. Aligned pairs: 1297744 of these: 160745 (12.4%) have multiple alignments 30163 ( 2.3%) are discordant alignments 77.1% concordant pair alignment rate.