Left reads: Input : 256394 Mapped : 211659 (82.6% of input) of these: 5890 ( 2.8%) have multiple alignments (806 have >20) Right reads: Input : 256394 Mapped : 212369 (82.8% of input) of these: 5931 ( 2.8%) have multiple alignments (806 have >20) 82.7% overall read mapping rate. Aligned pairs: 191210 of these: 5223 ( 2.7%) have multiple alignments 976 ( 0.5%) are discordant alignments 74.2% concordant pair alignment rate.