Left reads: Input : 577912 Mapped : 509982 (88.2% of input) of these: 156364 (30.7%) have multiple alignments (38516 have >20) Right reads: Input : 577912 Mapped : 490278 (84.8% of input) of these: 151556 (30.9%) have multiple alignments (38449 have >20) 86.5% overall read mapping rate. Aligned pairs: 440392 of these: 136463 (31.0%) have multiple alignments 11995 ( 2.7%) are discordant alignments 74.1% concordant pair alignment rate.