Left reads: Input : 246958 Mapped : 206173 (83.5% of input) of these: 4815 ( 2.3%) have multiple alignments (305 have >20) Right reads: Input : 246958 Mapped : 193443 (78.3% of input) of these: 4560 ( 2.4%) have multiple alignments (305 have >20) 80.9% overall read mapping rate. Aligned pairs: 170134 of these: 3992 ( 2.3%) have multiple alignments 3538 ( 2.1%) are discordant alignments 67.5% concordant pair alignment rate.