Left reads: Input : 700878 Mapped : 582585 (83.1% of input) of these: 141757 (24.3%) have multiple alignments (19996 have >20) Right reads: Input : 700878 Mapped : 568479 (81.1% of input) of these: 139743 (24.6%) have multiple alignments (19996 have >20) 82.1% overall read mapping rate. Aligned pairs: 511692 of these: 126581 (24.7%) have multiple alignments 10168 ( 2.0%) are discordant alignments 71.6% concordant pair alignment rate.