Left reads: Input : 1314832 Mapped : 1181103 (89.8% of input) of these: 117541 (10.0%) have multiple alignments (13219 have >20) Right reads: Input : 1314832 Mapped : 1143891 (87.0% of input) of these: 115360 (10.1%) have multiple alignments (13219 have >20) 88.4% overall read mapping rate. Aligned pairs: 1053415 of these: 107925 (10.2%) have multiple alignments 18844 ( 1.8%) are discordant alignments 78.7% concordant pair alignment rate.