Left reads: Input : 1010051 Mapped : 868607 (86.0% of input) of these: 113689 (13.1%) have multiple alignments (21573 have >20) Right reads: Input : 1010051 Mapped : 846381 (83.8% of input) of these: 111899 (13.2%) have multiple alignments (21573 have >20) 84.9% overall read mapping rate. Aligned pairs: 769516 of these: 102725 (13.3%) have multiple alignments 12012 ( 1.6%) are discordant alignments 75.0% concordant pair alignment rate.