Left reads: Input : 2699757 Mapped : 2300210 (85.2% of input) of these: 585540 (25.5%) have multiple alignments (131069 have >20) Right reads: Input : 2699757 Mapped : 2327314 (86.2% of input) of these: 594713 (25.6%) have multiple alignments (131112 have >20) 85.7% overall read mapping rate. Aligned pairs: 2054096 of these: 528540 (25.7%) have multiple alignments 45760 ( 2.2%) are discordant alignments 74.4% concordant pair alignment rate.