Left reads: Input : 1005232 Mapped : 835617 (83.1% of input) of these: 125774 (15.1%) have multiple alignments (9647 have >20) Right reads: Input : 1005232 Mapped : 820846 (81.7% of input) of these: 124351 (15.1%) have multiple alignments (9648 have >20) 82.4% overall read mapping rate. Aligned pairs: 743575 of these: 113879 (15.3%) have multiple alignments 9878 ( 1.3%) are discordant alignments 73.0% concordant pair alignment rate.