Left reads: Input : 795891 Mapped : 713395 (89.6% of input) of these: 132489 (18.6%) have multiple alignments (27620 have >20) Right reads: Input : 795891 Mapped : 687546 (86.4% of input) of these: 129233 (18.8%) have multiple alignments (27516 have >20) 88.0% overall read mapping rate. Aligned pairs: 630260 of these: 119178 (18.9%) have multiple alignments 14782 ( 2.3%) are discordant alignments 77.3% concordant pair alignment rate.