Left reads: Input : 963491 Mapped : 793387 (82.3% of input) of these: 142315 (17.9%) have multiple alignments (18138 have >20) Right reads: Input : 963491 Mapped : 777018 (80.6% of input) of these: 140739 (18.1%) have multiple alignments (18138 have >20) 81.5% overall read mapping rate. Aligned pairs: 699501 of these: 128312 (18.3%) have multiple alignments 15824 ( 2.3%) are discordant alignments 71.0% concordant pair alignment rate.