Left reads: Input : 295694 Mapped : 247870 (83.8% of input) of these: 12630 ( 5.1%) have multiple alignments (510 have >20) Right reads: Input : 295694 Mapped : 233846 (79.1% of input) of these: 12090 ( 5.2%) have multiple alignments (510 have >20) 81.5% overall read mapping rate. Aligned pairs: 207806 of these: 10828 ( 5.2%) have multiple alignments 5624 ( 2.7%) are discordant alignments 68.4% concordant pair alignment rate.