Left reads: Input : 1765813 Mapped : 1587232 (89.9% of input) of these: 169179 (10.7%) have multiple alignments (33324 have >20) Right reads: Input : 1765813 Mapped : 1477668 (83.7% of input) of these: 162134 (11.0%) have multiple alignments (33324 have >20) 86.8% overall read mapping rate. Aligned pairs: 1366563 of these: 149149 (10.9%) have multiple alignments 29935 ( 2.2%) are discordant alignments 75.7% concordant pair alignment rate.