Left reads: Input : 3047357 Mapped : 2697148 (88.5% of input) of these: 421983 (15.6%) have multiple alignments (56023 have >20) Right reads: Input : 3047357 Mapped : 2144100 (70.4% of input) of these: 343468 (16.0%) have multiple alignments (54400 have >20) 79.4% overall read mapping rate. Aligned pairs: 1991698 of these: 321254 (16.1%) have multiple alignments 39605 ( 2.0%) are discordant alignments 64.1% concordant pair alignment rate.