Left reads: Input : 268569 Mapped : 224845 (83.7% of input) of these: 9230 ( 4.1%) have multiple alignments (291 have >20) Right reads: Input : 268569 Mapped : 214544 (79.9% of input) of these: 8902 ( 4.1%) have multiple alignments (291 have >20) 81.8% overall read mapping rate. Aligned pairs: 190224 of these: 7936 ( 4.2%) have multiple alignments 5060 ( 2.7%) are discordant alignments 68.9% concordant pair alignment rate.