Left reads: Input : 253036 Mapped : 209681 (82.9% of input) of these: 9281 ( 4.4%) have multiple alignments (182 have >20) Right reads: Input : 253036 Mapped : 199336 (78.8% of input) of these: 8930 ( 4.5%) have multiple alignments (182 have >20) 80.8% overall read mapping rate. Aligned pairs: 175656 of these: 7926 ( 4.5%) have multiple alignments 3675 ( 2.1%) are discordant alignments 68.0% concordant pair alignment rate.