Left reads: Input : 292403 Mapped : 250077 (85.5% of input) of these: 8935 ( 3.6%) have multiple alignments (294 have >20) Right reads: Input : 292403 Mapped : 251442 (86.0% of input) of these: 9086 ( 3.6%) have multiple alignments (294 have >20) 85.8% overall read mapping rate. Aligned pairs: 225537 of these: 8062 ( 3.6%) have multiple alignments 5231 ( 2.3%) are discordant alignments 75.3% concordant pair alignment rate.